Skip to content
SPECIFICTION
Get listed

Bioconductor vs JSR

Bioconductor

bioconductor.org

JSR

jsr.io

Side by side

FigureBioconductorJSR
Price fromFreeFree
Free planYesYes
Free trial——
Open sourceYes—
WebYesYes
WindowsYes—
macOSYes—
LinuxYes—
API—Yes
Self-hostedYes—
Plans published21
Spec score · Package Registries9.1 (#1)7.7 (#17)

Plans

Bioconductor

  • BioconductorFree
  • FreeFree

Bioconductor pricing →

JSR

  • FreeFree

JSR pricing →

In their own words

Bioconductor

Bioconductor develops and shares free, open-source software for rigorous and reproducible analysis of biological data. It serves researchers and data scientists working with biological and genomic datasets. The project uses R, with most components distributed as R packages. Those packages support analysis of DNA microarray, sequence, flow, SNP, and other genetic or genomic data. Tools can associate genomic data with biological metadata from sources such as GenBank, Entrez genes, and PubMed. Each package includes one or more task-oriented vignettes, and reproducible research is a stated project goal. Bioconductor maintains a stable release updated twice a year and a development version for new features and packages. Each release is designed for a specific R version; the current release page lists Bioconductor 3.23 with R 4.6.0. Docker containers with preinstalled R and Bioconductor versions support reproducible environments. The project documents container deployment with Amazon ECS, Google Kubernetes Engine, Microsoft Azure Container Instances, and Docker Desktop or Docker Engine. Help is available through its Support site and community chat. The project began in 2001 and is overseen by a core team.

Visit bioconductor.org

JSR

JSR has no write-up on Specifiction yet; its figures are above.

Visit jsr.io