Doxygen vs Sphinx

Doxygen is a free documentation generator that turns source-code comments into reference material, parsing items such as classes, functions and variables. It supports C/C++, Lex, Java, Python, VHDL, PHP IDL, C#, Fortran, Objective-C 2.0 and some D sources. Output can be generated as HTML, PDF through LaTeX, Word through RTF or structured XML for external tools. Graphviz’s dot tool can add include-dependency, collaboration, call, directory-structure and class-hierarchy diagrams. Doxywizard provides a graphical interface for editing settings and running the generator on Windows, Linux and macOS; Doxygen also works on many Unix flavors. It supports HTML Help, docsets, Qt-Help and Eclipse Help, with more than 100 configurable options. The tool runs without registration and does not collect personal or usage data. It is self-hosted and licensed under the GNU General Public License, without express or implied warranty. Help is listed through Stack Overflow and the doxygen users mailing list; commercial feature and bug-fix support has limited capacity.

Sphinx is a free Python application that generates technical documentation from structured text. Authors can use reStructuredText or MyST Markdown; Markdown requires installing MyST-Parser separately. Built-in builders produce HTML, LaTeX for PDF, ePub, manual pages, Texinfo, and plain text. References can link sections, figures, tables, citations, glossaries, and code objects within one project or across projects. The autodoc extension imports documented modules and includes material from their docstrings. Themes and extensions, both built-in and third-party, add options such as diagrams, doctests, and API documentation. Other built-in extensions provide GitHub Pages publishing, Graphviz graphs, and intersphinx links. Sphinx also supports gettext-based translation and full-text search. It can be installed through Python and platform package managers, Docker, or from source, then deployed to services such as Read the Docs, GitHub Pages, GitLab Pages, Netlify, or self-hosted servers. Its code is released under the two-clause BSD license, and the project is community supported.