funkyheatmap

Spec sheet

Purpose

funkyheatmap generates heatmap-like visualizations for data frames, with annotations for rows and columns.Read 11 Oct 2026 · funkyheatmap.github.io

Free plan

YesRead 23 Sep 2026 · funkyheatmap.github.io

Support

The project page links to GitHub for bug reports.Read 11 Oct 2026 · funkyheatmap.github.io

License

The project page links to an MIT license.Read 11 Oct 2026 · funkyheatmap.github.io

Customization

Annotations can assign multiple palettes or geometries and group rows or columns into categories.Read 11 Oct 2026 · funkyheatmap.github.io

Dashboard type

staticRead 23 Sep 2026 · funkyheatmap.github.io

Data setup

The R function accepts a data frame and supports column information, row information, palettes, and legends for customizing a plot.Read 11 Oct 2026 · funkyheatmap.github.io

Data sources

R data frames; matricesRead 23 Sep 2026 · funkyheatmap.github.io

Example use

The documentation shows funkyheatmap recreating figures from the single-cell integration benchmarking project, scIB.Read 11 Oct 2026 · funkyheatmap.github.io

Executable requirements

The standalone executable requires Docker and Bash.Read 11 Oct 2026 · funkyheatmap.github.io

JavaScript adaptation

FunkyHeatmap.js is an interactive browser adaptation of the R package built with d3.js.Read 11 Oct 2026 · funkyheatmap.github.io

JavaScript dependencies

The JavaScript version can be added to a website using d3.js, lodash, and funkyheatmapjs from an npm package service, or installed in an npm project with npm or yarn.Read 11 Oct 2026 · funkyheatmap.github.io

Maintainer

Robrecht Cannoodt is listed as author and maintainer; Wouter Saelens is listed as an author.Read 11 Oct 2026 · funkyheatmap.github.io

Nextflow

A Nextflow module is available and its documented setup requires Docker and Bash.Read 11 Oct 2026 · funkyheatmap.github.io

Output

The executable example generates a plot as a PDF file.Read 11 Oct 2026 · funkyheatmap.github.io

Plot elements

The documentation demonstrates text, bars, rectangles, circles, and funky rectangles as plot geometries.Read 11 Oct 2026 · funkyheatmap.github.io

R package

The package can be installed with install.packages("funkyheatmap").Read 11 Oct 2026 · funkyheatmap.github.io

Scheduled refresh

NoRead 23 Sep 2026 · funkyheatmap.github.io

Standalone executable

A standalone executable accepts TSV data and a YAML file for palettes; its setup requires Docker and Bash.Read 11 Oct 2026 · funkyheatmap.github.io

Visual options

The getting started guide demonstrates text, bar, rectangle, funky rectangle, and circle geometries, alongside numerical and categorical palettes.Read 11 Oct 2026 · funkyheatmap.github.io

Windows and macOS downloads

CRAN lists Windows binaries and macOS binaries for arm64 and x86_64.Read 11 Oct 2026 · cran.r-project.org

Workflow option

A Nextflow pipeline is available and requires Docker and Bash.Read 11 Oct 2026 · funkyheatmap.github.io

Where Specifiction places it

• Data Visualization Software#87 of 987.2